>Example-1:chr21:37648661-37718904_1 Predictions on the direct strand No. Promoter P(promoter) Exon P(exon) P(donor) CpG Window Rank 1 00023223..00023792 1.0000 00023723..00023784 1.0000 0.9940 00023779..00023980 1 1 00023425..00023994 1.0000 00023925..00024627 1.0000 0.9863 00023779..00023980 2 1 00023425..00023994 1.0000 00023925..00024031 1.0000 0.9278 00023779..00023980 3 2 00029597..00030166 0.5553 00030097..00030243 0.6103 0.9983 Non-CpG-related 1 >Example-1:chr21:37648661-37718904_1 Predictions on the complementary strand No. Promoter P(promoter) Exon P(exon) P(donor) CpG Window Rank 1 00024388..00023819 1.0000 00023888..00023827 1.0000 0.9967 00023991..00023790 1 >Example-2:chr22:26280271-26340339_1 Predictions on the direct strand No. Promoter P(promoter) Exon P(exon) P(donor) CpG Window Rank 1 00015163..00015732 0.4724 00015663..00015830 0.5993 0.8777 Non-CpG-related 1 2 00029942..00030511 1.0000 00030442..00031402 1.0000 0.9998 00030208..00030409 1 2 00029420..00029989 1.0000 00029920..00030089 1.0000 0.9949 00030208..00030409 2 >Example-2:chr22:26280271-26340339_1 Predictions on the complementary strand No. Promoter P(promoter) Exon P(exon) P(donor) CpG Window Rank 1 00030456..00029887 1.0000 00029956..00029488 1.0000 0.9891 00030411..00030210 1 1 00030456..00029887 1.0000 00029956..00029075 1.0000 0.9805 00030411..00030210 2 1 00030456..00029887 1.0000 00029956..00029829 1.0000 0.9752 00030411..00030210 3 1 00030456..00029887 1.0000 00029956..00029166 1.0000 0.9612 00030411..00030210 4 1 00030468..00029899 1.0000 00029968..00029380 1.0000 0.9558 00030411..00030210 5 2 00028265..00027696 0.9794 00027765..00027219 0.8676 0.9923 Non-CpG-related 1 >Example-3:chr22:33423701-33513798_1 Predictions on the direct strand No. Promoter P(promoter) Exon P(exon) P(donor) CpG Window Rank 1 00007748..00008317 1.0000 00008248..00008648 1.0000 0.9277 00007941..00008142 1 1 00007565..00008134 1.0000 00008065..00008161 1.0000 0.8851 00007941..00008142 2 2 00029954..00030523 1.0000 00030454..00030515 1.0000 0.9449 00030113..00030314 1 3 00037118..00037687 0.5632 00037618..00037801 0.8915 0.9950 Non-CpG-related 1 4 00049203..00049772 0.7803 00049703..00049918 0.5768 0.5447 Non-CpG-related 1 5 00057503..00058072 0.9129 00058003..00058148 0.5337 0.8157 Non-CpG-related 1 >Example-3:chr22:33423701-33513798_1 Predictions on the complementary strand No. Promoter P(promoter) Exon P(exon) P(donor) CpG Window Rank 1 00053077..00052508 0.4383 00052577..00052389 0.5070 0.5636 Non-CpG-related 1 2 00030579..00030010 1.0000 00030079..00030018 1.0000 0.9985 00030318..00030117 1 2 00030437..00029868 1.0000 00029937..00029822 1.0000 0.9739 00030318..00030117 2 3 00014015..00013446 0.7060 00013515..00013349 0.5275 0.9832 Non-CpG-related 1 4 00008334..00007765 1.0000 00007834..00006838 1.0000 0.9981 00008143..00007942 1 >Example-4:chr16:5575001-5650000_1 Predictions on the direct strand No. Promoter P(promoter) Exon P(exon) P(donor) CpG Window Rank 1 00007375..00007944 0.6291 00007875..00008617 0.8470 0.9958 00007639..00007840 1 2 00068304..00068873 1.0000 00068804..00068936 1.0000 0.9344 00068705..00068906 1 >Example-4:chr16:5575001-5650000_1 Predictions on the complementary strand No. Promoter P(promoter) Exon P(exon) P(donor) CpG Window Rank 1 00069318..00068749 1.0000 00068818..00068697 1.0000 0.9989 00068907..00068706 1 1 00069265..00068696 1.0000 00068765..00068387 1.0000 0.9421 00068907..00068706 2 2 00065688..00065119 0.4056 00065188..00064973 0.6985 0.9965 Non-CpG-related 1 3 00008215..00007646 0.4104 00007715..00007499 0.5919 0.9955 00007847..00007646 1