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CURRICULUM VITAE
Address : PO Box 100, 1 Bungtown Road
Cold Spring Harbor Laboratory
NY 11724, U.S.A.
Phone : +1 (516)
367-8866.
Fax
: +1 (516)
367-8461.
E-Mail : ioshikhe@cshl.org
CURRENT POSITION :
1997 - now Postdoctoral fellow in Cold Spring Harbor Laboratory.
Supervisor - Dr. M.Q.
Zhang.
Subject : Sequence analysis of eukaryotic promoters, eukaryotic promoter
recognition.
Development, management and analysis of eukaryotic promoter DNA databases.
EDUCATION :
1992 - 1997 The
Weizmann Institute of Science (Rehovot, Israel),
Department of Structural
Biology.
Ph.D. degree under the supervision of Prof.
E.N. Trifonov & Dr.
L. Ulanovsky.
Subject : Recognition of subtle patterns in DNA sequences.
1. Development, management and analysis of nucleosome DNA sequence database.
Extraction of common nucleosome DNA sequence pattern by multiple sequence
alignment,
resonance and linguistic analysis. Nucleosome structure and positioning.
2. Calculation of suboptimal single-stranded DNA folding and evaluation of its
influence on
efficiency of DNA sequencing by modular primers.
The work included development of original algorithms and software.
1978 - 1983 State University in Dushanbe
(USSR),
Department of Physics (Theoretical Physics) (MS degree).
Thesis : Averaged description of biological macromolecule in solution.
Additional studies :
1998,1997 Cold Spring Harbor
Laboratory,
Computational
Genomics course.
1995
'Telran' company (Nes-Ziona, Israel).
UNIX system administration course.
1987 - 1988 Correspondence studies under the
supervision of Prof. M.D.
Frank-Kamenetsky
(Institute of Molecular Genetics, Moscow).
Subject : Thermodynamics of B - to Z - DNA transition.
COMPUTER EXPERIENCE :
Programming languages : C, Perl, Turbo-Pascal, Fortran, Basic,
HTML.
Environment
:
UNIX (Sun, Digital, IRIX, AIX), NT, Windows, MS-DOS, OS.
Computers
:
Sun, Silicon Graphics, Macintosh, PC-NT, PC, MF.
WORKING EXPERIENCE :
1990 - 1994 Research fellow at the College of Judea and
Samaria (Ariel, Israel).
Work subject : Creation of nucleosomal DNA sequence database.
Extraction of nucleosomal DNA sequence pattern by multiple sequence
alignment.
1989
Senior research fellow (analyst, programmer) at
"Ravshan" Scientific-Technical Center (Dushanbe).
Work subjects :
1. Development of a software package for optimum planning of a schedule for
airplane flights.
2. Adjusting of software package for mathematical modeling of turbulent mixing
of gas streams
with suspended admixtures in chemical reactors.
1986 - 1989 Research fellow (analyst, programmer) at the State
University (Dushanbe).
Work subjects :
1. Computer mathematical modeling of behavior and calculation of
seismoresistance of
electrical equipment while affecting by earthquake. Development of a software
package.
2. Development of software package for optimum planning of a non-stop
manufacture for
oil-processing industry.
1984 - 1986 Programmer (positions: engineer, senior engineer) at
the
Computer Center of the Ministry of Building, Dushanbe.
1983 - 1984 Senior lab assistant at the Medical Institute,
Dushanbe.